Roman Bushuiev

Všechny publikace

Nejnovější publikace

Self-supervised learning of molecular representations from millions of tandem mass spectra using DreaMS

R. Bushuiev A. Bushuiev R. Samusevich C. Brungs J. Šivic T. Pluskal

Nature Biotechnology 2025: Early View

MassSpecGym: A benchmark for the discovery and identification of molecules

R. Bushuiev A. Bushuiev N. F. de Jonge A. Young F. Kretschmer R. Samusevich J. Heirman F. Wang L. Zhang K. Dührkop M. Ludwig N. A. Haupt A. Kalia C. Brungs R. Schmid R. Greiner B. Wang D. S. Wishart L. Liu J. Rousu W. Bittremieux H. Rost T. D. Mak S. Hassoun F. Huber J. J. J. van der Hooft M. A. Stravs S. Böcker J. Sivic T. Pluskal

Conference on Neural Information Processing Systems (NeurIPS) 38: 1-31 (2024)

Revealing data leakage in protein interaction benchmarks

A. Bushuiev R. Bushuiev J. Sedlář T. Pluskal J. Damborský S. Mazurenko J. Šivic

International Conference on Learning Representations (ICLR) 12: 1-13 (2024)

Learning to design protein-protein interactions with enhanced generalization

A. Bushuiev R. Bushuiev P. Kouba A. Filkin M. Gabrielová M. Gabriel J. Sedlář T. Pluskal J. Damborský S. Mazurenko J. Šivic

International Conference on Learning Representations (ICLR) 12: 1-26 (2024)